Evaluation of tools for identifying large copy number variations from ultra-low-coverage whole-genome sequencing data
Copy number analysis of whole-genome data using BIC-seq2 and its application to detection of cancer susceptibility variants
![PDF] Copy number analysis of whole-genome data using BIC-seq2 and its application to detection of cancer susceptibility variants | Semantic Scholar PDF] Copy number analysis of whole-genome data using BIC-seq2 and its application to detection of cancer susceptibility variants | Semantic Scholar](https://d3i71xaburhd42.cloudfront.net/aa261b192f8eef42d0724a397ee0515e738b588d/6-Figure3-1.png)
PDF] Copy number analysis of whole-genome data using BIC-seq2 and its application to detection of cancer susceptibility variants | Semantic Scholar
![PDF] Copy number analysis of whole-genome data using BIC-seq2 and its application to detection of cancer susceptibility variants | Semantic Scholar PDF] Copy number analysis of whole-genome data using BIC-seq2 and its application to detection of cancer susceptibility variants | Semantic Scholar](https://d3i71xaburhd42.cloudfront.net/aa261b192f8eef42d0724a397ee0515e738b588d/10-Table1-1.png)
PDF] Copy number analysis of whole-genome data using BIC-seq2 and its application to detection of cancer susceptibility variants | Semantic Scholar
![True CNVs in a simulated genome and detected by BIC-seq2. a Forty CNVs... | Download Scientific Diagram True CNVs in a simulated genome and detected by BIC-seq2. a Forty CNVs... | Download Scientific Diagram](https://www.researchgate.net/publication/315062499/figure/fig4/AS:962449238925313@1606477188214/True-CNVs-in-a-simulated-genome-and-detected-by-BIC-seq2-a-Forty-CNVs-were-introduced-in.gif)
True CNVs in a simulated genome and detected by BIC-seq2. a Forty CNVs... | Download Scientific Diagram
![PDF] WisecondorX: improved copy number detection for routine shallow whole-genome sequencing | Semantic Scholar PDF] WisecondorX: improved copy number detection for routine shallow whole-genome sequencing | Semantic Scholar](https://d3i71xaburhd42.cloudfront.net/7ba883a32a465c6790a2ac06aed46b658db5d38f/6-Figure3-1.png)
PDF] WisecondorX: improved copy number detection for routine shallow whole-genome sequencing | Semantic Scholar
![Bioinformatics Applications Note Genome Analysis Control-free Calling of Copy Number Alterations in Deep-sequencing Data Using Gc-content Normalization | Semantic Scholar Bioinformatics Applications Note Genome Analysis Control-free Calling of Copy Number Alterations in Deep-sequencing Data Using Gc-content Normalization | Semantic Scholar](https://d3i71xaburhd42.cloudfront.net/5b99159dcb6ff6bf96a1cff7cccaee0836a28b28/2-Figure1-1.png)
Bioinformatics Applications Note Genome Analysis Control-free Calling of Copy Number Alterations in Deep-sequencing Data Using Gc-content Normalization | Semantic Scholar
![Frontiers | A Cluster-Based Approach for the Discovery of Copy Number Variations From Next-Generation Sequencing Data Frontiers | A Cluster-Based Approach for the Discovery of Copy Number Variations From Next-Generation Sequencing Data](https://www.frontiersin.org/files/Articles/699510/fgene-12-699510-HTML-r1/image_m/fgene-12-699510-g004.jpg)
Frontiers | A Cluster-Based Approach for the Discovery of Copy Number Variations From Next-Generation Sequencing Data
![WisecondorX: improved copy number detection for routine shallow whole-genome sequencing. - Abstract - Europe PMC WisecondorX: improved copy number detection for routine shallow whole-genome sequencing. - Abstract - Europe PMC](https://europepmc.org/articles/PMC6393301/bin/gky1263fig1.jpg)
WisecondorX: improved copy number detection for routine shallow whole-genome sequencing. - Abstract - Europe PMC
![Frontiers | A Cluster-Based Approach for the Discovery of Copy Number Variations From Next-Generation Sequencing Data Frontiers | A Cluster-Based Approach for the Discovery of Copy Number Variations From Next-Generation Sequencing Data](https://www.frontiersin.org/files/Articles/699510/fgene-12-699510-HTML-r1/image_m/fgene-12-699510-g005.jpg)
Frontiers | A Cluster-Based Approach for the Discovery of Copy Number Variations From Next-Generation Sequencing Data
![Analytical Validation of Clinical Whole-Genome and Transcriptome Sequencing of Patient-Derived Tumors for Reporting Targetable Variants in Cancer - ScienceDirect Analytical Validation of Clinical Whole-Genome and Transcriptome Sequencing of Patient-Derived Tumors for Reporting Targetable Variants in Cancer - ScienceDirect](https://ars.els-cdn.com/content/image/1-s2.0-S1525157817306219-gr5.jpg)
Analytical Validation of Clinical Whole-Genome and Transcriptome Sequencing of Patient-Derived Tumors for Reporting Targetable Variants in Cancer - ScienceDirect
GitHub - d3b-center/d3b_bic-seq2: CWL Implementation based on this tool http://compbio.med.harvard.edu/BIC-seq/ and this cluster implementation : https://github.com/ding-lab/BICSEQ2
![True CNVs in a simulated genome and detected by BIC-seq2. a Forty CNVs... | Download Scientific Diagram True CNVs in a simulated genome and detected by BIC-seq2. a Forty CNVs... | Download Scientific Diagram](https://www.researchgate.net/publication/315062499/figure/fig4/AS:962449238925313@1606477188214/True-CNVs-in-a-simulated-genome-and-detected-by-BIC-seq2-a-Forty-CNVs-were-introduced-in_Q320.jpg)
True CNVs in a simulated genome and detected by BIC-seq2. a Forty CNVs... | Download Scientific Diagram
![PDF] dpGMM: A Dirichlet Process Gaussian Mixture Model for Copy Number Variation Detection in Low-Coverage Whole-Genome Sequencing Data | Semantic Scholar PDF] dpGMM: A Dirichlet Process Gaussian Mixture Model for Copy Number Variation Detection in Low-Coverage Whole-Genome Sequencing Data | Semantic Scholar](https://d3i71xaburhd42.cloudfront.net/67599f97fcb1685769db1734a10ad2519b8ef1c2/10-Table3-1.png)
PDF] dpGMM: A Dirichlet Process Gaussian Mixture Model for Copy Number Variation Detection in Low-Coverage Whole-Genome Sequencing Data | Semantic Scholar
![PDF) Copy number analysis of whole-genome data using BIC-seq2 and its application to detection of cancer susceptibility variants PDF) Copy number analysis of whole-genome data using BIC-seq2 and its application to detection of cancer susceptibility variants](https://www.researchgate.net/publication/303797220/figure/fig5/AS:369299651874818@1465059306266/Performance-of-BIC-seq2-CNVnator-FREEC-and-ReadDepth-for-simulated-data_Q320.jpg)
PDF) Copy number analysis of whole-genome data using BIC-seq2 and its application to detection of cancer susceptibility variants
![PDF] WisecondorX: improved copy number detection for routine shallow whole-genome sequencing | Semantic Scholar PDF] WisecondorX: improved copy number detection for routine shallow whole-genome sequencing | Semantic Scholar](https://d3i71xaburhd42.cloudfront.net/7ba883a32a465c6790a2ac06aed46b658db5d38f/6-Figure4-1.png)
PDF] WisecondorX: improved copy number detection for routine shallow whole-genome sequencing | Semantic Scholar
![WisecondorX: improved copy number detection for routine shallow whole-genome sequencing. - Abstract - Europe PMC WisecondorX: improved copy number detection for routine shallow whole-genome sequencing. - Abstract - Europe PMC](https://europepmc.org/articles/PMC6393301/bin/gky1263fig2.jpg)
WisecondorX: improved copy number detection for routine shallow whole-genome sequencing. - Abstract - Europe PMC
![Frontiers | A Cluster-Based Approach for the Discovery of Copy Number Variations From Next-Generation Sequencing Data Frontiers | A Cluster-Based Approach for the Discovery of Copy Number Variations From Next-Generation Sequencing Data](https://www.frontiersin.org/files/Articles/699510/fgene-12-699510-HTML-r1/image_m/fgene-12-699510-t003.jpg)